Volume 13; Issue 1 Suppleme

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BMC Genomics
Volume 13; Issue 1 Suppleme

BMC Genomics

Volume 13; Issue 1 Suppleme

1

The Tenth Asia Pacific Bioinformatics Conference (APBC 2012)

Yi-Ping Phoebe Chen, Peer Bork

Journal:

Year:

2012

Language:

english

File:

PDF, 69 KB

english, 2012

2

Improving ChIP-seq peak-calling for functional co-regulator binding by integrating multiple sources of biological information

Hatice Ulku Osmanbeyoglu, Ryan J Hartmaier, Steffi Oesterreich, Xinghua Lu

Journal:

Year:

2012

Language:

english

File:

PDF, 433 KB

english, 2012

3

Identification of gene-oriented exon orthology between human and mouse

Gloria C-L Fu, Wen-chang Lin

Journal:

Year:

2012

Language:

english

File:

PDF, 860 KB

english, 2012

4

A study on promoter characteristics of head-to-head genes inSaccharomyces cerevisiae

Darby Tien-Hao Chang, Chi-Yeh Wu, Chen-Yu Fan

Journal:

Year:

2012

Language:

english

File:

PDF, 695 KB

english, 2012

5

An estimation method for inference of gene regulatory net-work using Bayesian network with uniting of partial problems

Yukito Watanabe, Shigeto Seno, Yoichi Takenaka, Hideo Matsuda

Journal:

Year:

2012

Language:

english

File:

PDF, 1.66 MB

english, 2012

6

miRNA arm selection and isomiR distribution in gastric cancer

Sung-Chou Li, Yu-Lun Liao, Meng-Ru Ho, Kuo-Wang Tsai, Chun-Hung Lai, Wen-chang Lin

Journal:

Year:

2012

Language:

english

File:

PDF, 1.18 MB

english, 2012

7

CPU-GPU hybrid accelerating the Zuker algorithm for RNA secondary structure prediction applications

Guoqing Lei, Yong Dou, Wen Wan, Fei Xia, Rongchun Li, Meng Ma, Dan Zou

Journal:

Year:

2012

Language:

english

File:

PDF, 1.34 MB

english, 2012

8

Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics

Trupti Joshi, Kapil Patil, Michael R Fitzpatrick, Levi D Franklin, Qiuming Yao, Jeffrey R Cook, Zheng Wang, Marc Libault, Laurent Brechenmacher, Babu Valliyodan, Xiaolei Wu, Jianlin Cheng, Gary Stacey

Journal:

Year:

2012

Language:

english

File:

PDF, 1.75 MB

english, 2012

9

Detection of interacting transcription factors in human tissues using predicted DNA binding affinity

Alena Myšičková, Martin Vingron

Journal:

Year:

2012

Language:

english

File:

PDF, 1.80 MB

english, 2012

10

GPMiner: an integrated system for mining combinatorialcis-regulatory elements in mammalian gene group

Tzong-Yi Lee, Wen-Chi Chang, Justin Bo-Kai Hsu, Tzu-Hao Chang, Dray-Ming Shien

Journal:

Year:

2012

Language:

english

File:

PDF, 1.07 MB

english, 2012

11

Quantification and clustering of phenotypic screening data using time-series analysis for chemotherapy of schistosomiasis

Hyokyeong Lee, Asher Moody-Davis, Utsab Saha, Brian M Suzuki, Daniel Asarnow, Steven Chen, Michelle Arkin, Conor R Caffrey, Rahul Singh

Journal:

Year:

2012

Language:

english

File:

PDF, 1.78 MB

english, 2012

12

Learning generative models of molecular dynamics

Narges Sharif Razavian, Hetunandan Kamisetty, Christopher J Langmead

Journal:

Year:

2012

Language:

english

File:

PDF, 4.23 MB

english, 2012

13

Identifying regulational alterations in gene regulatory networks by state space representation of vector autoregressive models and variational annealing

Kaname Kojima, Seiya Imoto, Rui Yamaguchi, André Fujita, Mai Yamauchi, Noriko Gotoh, Satoru Miyano

Journal:

Year:

2012

Language:

english

File:

PDF, 1.45 MB

english, 2012

14

A mixture framework for inferring ancestral gene orders

Yiwei Zhang, Fei Hu, Jijun Tang

Journal:

Year:

2012

Language:

english

File:

PDF, 489 KB

english, 2012

15

A model for biased fractionation after whole genome duplication

David Sankoff, Chunfang Zheng, Baoyong Wang

Journal:

Year:

2012

Language:

english

File:

PDF, 1.58 MB

english, 2012

16

Construction and analysis of a plant non-specific lipid transfer protein database (nsLTPDB)

Nai-Jyuan Wang, Chi-Ching Lee, Chao-Sheng Cheng, Wei-Cheng Lo, Ya-Fen Yang, Ming-Nan Chen, Ping-Chiang Lyu

Journal:

Year:

2012

Language:

english

File:

PDF, 2.23 MB

english, 2012